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​What is the correct order of enzyme actions during the long-patch base excision repair in humans?​
Question

What is the correct order of enzyme actions during the long-patch base excision repair in humans?

A.

Glycosylase, Lyase, AP endonuclease 1, DNA Polβ, DNA Ligase 3

B.

Glycosylase, AP endonuclease 1, DNA Polδε, Flap endonuclease 1, DNA Ligase 1

C.

Glycosylase, AP endonuclease 1, DNA Polβ, Flap endonuclease 1, DNA Ligase 1

D.

Glycosylase, AP endonuclease 1, DNA Polδε, Flap endonuclease 1, DNA Ligase 3

Correct option is B

The correct answer is (b).

In long-patch base excision repair (BER) in humans, the process involves the following enzymes:

1.      Glycosylase removes the damaged base, creating an abasic site.

2.      AP endonuclease 1 cleaves the phosphodiester backbone at the abasic site.

3.      DNA Polδ (or Polβ in some contexts) fills in the gap with new DNA, performing the repair synthesis.

4.      Flap endonuclease 1 removes the displaced DNA flap generated during repair synthesis.

5.      Finally, DNA Ligase 1 seals the nick in the DNA, completing the repair.

Incorrect options-

Option (a): Lyase activity is part of short-patch BER involving DNA Polβ’s lyase function, so this is not part of long-patch BER.

Option (c): Uses DNA Polβ and DNA Ligase 1, but DNA Polβ is primarily involved in short-patch repair.

Option (d): Combines DNA Polδ (correct for long-patch) with DNA Ligase 3 (correct for short-patch), which is inconsistent with the long-patch BER pathway.

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