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Given below are some statements with blank spaces indicated by '________'.A. A plasmid cloning vector digested with an enzyme (with a single restricti
Question

Given below are some statements with blank spaces indicated by '________'.

A. A plasmid cloning vector digested with an enzyme (with a single restriction site in the plasmid) that generates 3' overhangs can be made blunt-ended using __________.
B. DNA with a nucleotide composition of 30% A, 35% G, 20% C and 15% T is most likely __________.
C. Production of only truncated molecules of transgene-derived mRNA in transgenic plants generated using a transgene from a prokaryotic source is most likely due to __________.
D. __________ is a method for identifying the positions where individual DNA-binding proteins attach to a genome.

Which one of the following options has the correct sequence of terms that can be used to complete the above statements (from A to D) such that all statements become true?

A.

A - Taq polymerase; B - single-stranded; C - presence of mRNA instability sequences; D - FISH

B.

A - Pfu polymerase; B - double-stranded; C - codon usage variations; D - ChIP-seq

C.

A - Mung bean nuclease; B - single-stranded; C - presence of potential poly-adenylation signals in the transgene sequence; D - ChIP-seq

D.

A - Reverse transcriptase; B - single-stranded; C - absence of polyA signal; D - PFGE

Correct option is C

Let’s analyze each statement and its matching option:

  • Statement A: A plasmid cloning vector digested with an enzyme (with a single restriction site in the plasmid) that generates 3' overhangs can be made blunt-ended using ______.

    • Correct Answer: Mung bean nuclease (from Option 3).

      • Explanation: Mung bean nuclease is an enzyme that can remove 3' overhangs, generating blunt-ended DNA fragments suitable for cloning. This enzyme can be used to blunt-end DNA that has 3' overhangs following restriction digestion.

  • Statement B: DNA with a nucleotide composition of 30% A, 35% G, 20% C, and 15% T is most likely ______.

    • Correct Answer: single-stranded (from Option 3).

      • Explanation: The provided nucleotide composition of DNA (30% A, 35% G, 20% C, 15% T) suggests a higher proportion of guanine (G), which is typical of single-stranded DNA. The nucleotide composition is more often seen in single-stranded forms due to the proportion of GC content.

  • Statement C: Production of only truncated molecules of transgene-derived mRNA in transgenic plants generated using a transgene from a prokaryotic source is most likely due to ______.

    • Correct Answer: presence of potential poly-adenylation signals in the transgene sequence (from Option 3).

      • Explanation: In prokaryotic systems, mRNA often lacks proper poly-adenylation, a feature required for the stability and full-length production of mRNA in eukaryotes. Without this signal, the mRNA produced in plants from a prokaryotic transgene might be truncated due to the lack of appropriate poly-adenylation, which is necessary for processing and stability.

  • Statement D: ______ is a method for identifying the positions where individual DNA-binding proteins attach to a genome.

    • Correct Answer: ChIP-seq (from Option 3).

      • Explanation: ChIP-seq (Chromatin Immunoprecipitation sequencing) is a widely used method to identify the binding sites of DNA-binding proteins across the genome. This technique allows researchers to map protein-DNA interactions.

Final Answer: Option 3. A – Mung bean nuclease; B – single-stranded; C – presence of potential poly-adenylation signals in the transgene sequence; D – ChIP-seq

Information Booster:

  • Mung bean nuclease: This enzyme is used for generating blunt-ended DNA by removing 3' overhangs. It is helpful in preparing DNA fragments for cloning or other applications requiring blunt ends.

  • ChIP-seq: A powerful technique used to study protein-DNA interactions, where DNA is cross-linked to proteins, sheared, and immunoprecipitated with antibodies against the protein of interest. The enriched DNA is then sequenced to identify binding sites.

  • Poly-adenylation: In eukaryotic cells, poly-adenylation is essential for the stability and processing of mRNA. Prokaryotic genes lack poly-adenylation signals, which can cause premature termination of mRNA in transgenic plants expressing such genes.


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