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    ​Which one of the following correctly describes the spectroscopic experiment that would help distinguish between a α helix, a 3₁₀ helix and a π helix?
    Question

    Which one of the following correctly describes the spectroscopic experiment that would help distinguish between a α helix, a 3₁₀ helix and a π helix?

    A.

    Near UV absorption spectrum between 250–300nm

    B.

    Fluorescence emission spectra between 350–400nm

    C.

    1H NMR spectroscopy involving Hydrogen/Deuterium exchange

    D.

    Near UV Circular Dichroism spectrum between 250–300nm

    Correct option is C

    Explanation -

    ¹H NMR with H/D exchange is a powerful tool to study backbone amide proton protection due to hydrogen bonding.
    Different helical conformations (α, 3₁₀, π) have distinct hydrogen bonding patterns:
                                                                           α-helix: i → i+4 hydrogen bonding
                                                                           3₁₀ helix: i → i+3
                                                                           π-helix: i → i+5
    These variations affect how exposed or protected the backbone amide protons are from solvent. During H/D exchange, solvent-accessible amide protons exchange faster with deuterium.
    Thus, NMR can detect which protons are protected, helping identify the type of helix present.

    Option c - 1H NMR spectroscopy involving Hydrogen/Deuterium exchange
    It directly measures the rate at which amide protons exchange with deuterium. Since α, 3₁₀, and π helices differ in their hydrogen bonding, the protection of amide protons will be distinct.
    NMR gives residue-level information — you can tell which residues are in which type of helix. It is a quantitative and site-specific method.

    Incorrect options-
    Option a  - Near UV absorption spectrum between 250–300nm 
    Monitors aromatic side chains like Trp, Tyr.
    Tells about tertiary structure, not backbone conformation.

    Option b -  Fluorescence emission spectra between 350–400nm
    Again, mostly detects side chains like Trp.
    Not useful for detecting helix type.

    Option d - Near UV Circular Dichroism spectrum between 250–300nm
    Far UV CD (190–250 nm) can distinguish α-helix vs β-sheet.
    Near UV CD (250–300 nm) focuses on aromatic side chains, not backbone.
    Even Far UV CD cannot distinguish α vs 3₁₀ vs π clearly.

     So, the correct answer is option c - 1H NMR spectroscopy involving Hydrogen/Deuterium exchange


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