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    Some of the steps in the process of eukaryotic DNA replication mentioned below require hydrolysis of ATP: A. Phosphodiester bond formation B. DNA stra
    Question

    Some of the steps in the process of eukaryotic DNA replication mentioned below require hydrolysis of ATP:
    A. Phosphodiester bond formation
    B. DNA strand separation by helicase
    C. Clamp-loader association with clamp and DNA
    D. Joining of Okazaki fragments

    Choose the following option that correctly identifies all the steps utilizing ATP hydrolysis.

    A.

    A, B and D only

    B.

    B, C and D only

    C.

    B and C only

    D.

    B and D only.

    Correct option is D

    Explanation-

    Correct statements-

    Statement B - DNA strand separation by helicase
    Helicase enzymes unwind the DNA double helix at the replication fork by breaking hydrogen bonds between base pairs. This process requires ATP hydrolysis for the helicase to translocate along the DNA strand.
    Statement D - Joining of Okazaki fragments
    DNA ligase seals the nicks between Okazaki fragments on the lagging strand. In eukaryotes, this enzyme uses ATP as a cofactor to form the phosphodiester bond during ligation.

    Incorrect Statements-
    Statement A - Phosphodiester bond formation
    Though energy is used to form the phosphodiester bond, it comes from the dNTPs themselves, not from ATP hydrolysis. DNA polymerase uses the high-energy phosphate bonds of dATP, dGTP, dCTP, and dTTP.
    Statement C - Clamp-loader association with clamp and DNA
    False in eukaryotes, may not be as ATP-dependent as in prokaryotes
    Although in prokaryotes, the clamp loader uses ATP to load the sliding clamp (β-clamp), in eukaryotes, the process is more complex and may not require ATP hydrolysis as directly or universally.
    Thus, this may be considered non-essential ATP use in this context.

     Final Answer - Only B and D are correct → Option d

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